{"Sample":"sample","Mut_type":"1-snv","Chr":"chr10","Pos":61902249,"Ref":"C","Alt":"T","SimpleRepeat_TRF":"N","Neighborhood_sequence":"GCAAACCAAGAATTTTGTCCTTTGGCGACTTTTTCTTTGTA","read_length":150,"mut_type":"snv","alt_length":1,"total_read":36,"soft_clipped_read":36,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":139,"post_support_length":6,"short_support_length":6,"pre_minimum_length":70,"post_minimum_length":6,"pre_farthest":290,"post_farthest":6,"low_quality_base_rate_under_q18":0.00556,"low_quality_pre":0,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr11","Pos":2133646,"Ref":"C","Alt":"A","SimpleRepeat_TRF":"N","Neighborhood_sequence":"ATGCCACGGCTGCGACGGCTAACACGGCTTGCGGGCCTGCC","read_length":150,"mut_type":"snv","alt_length":1,"total_read":18,"soft_clipped_read":18,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":112,"post_support_length":8,"short_support_length":8,"pre_minimum_length":86,"post_minimum_length":8,"pre_farthest":296,"post_farthest":8,"low_quality_base_rate_under_q18":0.00444,"low_quality_pre":0.01111,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr11","Pos":32434897,"Ref":"T","Alt":"C","SimpleRepeat_TRF":"N","Neighborhood_sequence":"GGCACTGCTCCTCGTGCGGCCCCGCGCCGCCCCAGCTCGGC","read_length":150,"mut_type":"snv","alt_length":1,"total_read":41,"soft_clipped_read":20,"flag_hairpin":41,"hairpin_length":15,"pre_support_length":140,"post_support_length":95,"short_support_length":10,"pre_minimum_length":5,"post_minimum_length":9,"pre_farthest":219,"post_farthest":95,"low_quality_base_rate_under_q18":0.02988,"low_quality_pre":0.03902,"low_quality_post":0.01951,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr11","Pos":67434027,"Ref":"G","Alt":"T","SimpleRepeat_TRF":"N","Neighborhood_sequence":"AATCCCAGCCAGCGGATTGGTGGTGGCCCAGGGGATGCTGC","read_length":150,"mut_type":"snv","alt_length":1,"total_read":29,"soft_clipped_read":27,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":141,"post_support_length":8,"short_support_length":8,"pre_minimum_length":68,"post_minimum_length":5,"pre_farthest":175,"post_farthest":8,"low_quality_base_rate_under_q18":0.01609,"low_quality_pre":0.0069,"low_quality_post":0.02759,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr13","Pos":48379751,"Ref":"A","Alt":"G","SimpleRepeat_TRF":"N","Neighborhood_sequence":"GTGGGCAGATCAGGAGGTCAGGGCATCAAGATCATCCTGGC","read_length":150,"mut_type":"snv","alt_length":1,"total_read":15,"soft_clipped_read":2,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":149,"post_support_length":108,"short_support_length":43,"pre_minimum_length":41,"post_minimum_length":0,"pre_farthest":270,"post_farthest":323,"low_quality_base_rate_under_q18":0.00222,"low_quality_pre":0.00667,"low_quality_post":0.00667,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr14","Pos":81108357,"Ref":"T","Alt":"C","SimpleRepeat_TRF":"N","Neighborhood_sequence":"AATTCATTCTCTCTCTCTCTCTCTCTCTCTCCCTCTAGTTA","read_length":150,"mut_type":"snv","alt_length":1,"total_read":33,"soft_clipped_read":21,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":146,"post_support_length":149,"short_support_length":14,"pre_minimum_length":0,"post_minimum_length":3,"pre_farthest":146,"post_farthest":150,"low_quality_base_rate_under_q18":0.06029,"low_quality_pre":0.0303,"low_quality_post":0.09394,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr15","Pos":98891503,"Ref":"C","Alt":"T","SimpleRepeat_TRF":"N","Neighborhood_sequence":"AACACCTACAGGTTTGAGGGTTGGCGCTGTGTGGACCGTGA","read_length":150,"mut_type":"snv","alt_length":1,"total_read":14,"soft_clipped_read":14,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":124,"post_support_length":6,"short_support_length":6,"pre_minimum_length":108,"post_minimum_length":6,"pre_farthest":232,"post_farthest":6,"low_quality_base_rate_under_q18":0.00286,"low_quality_pre":0.01429,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr16","Pos":72795046,"Ref":"G","Alt":"A","SimpleRepeat_TRF":"N","Neighborhood_sequence":"GTGGAGCTGCTGATGCTCCTACCAGTGCTCAAATGACGGAA","read_length":150,"mut_type":"snv","alt_length":1,"total_read":22,"soft_clipped_read":20,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":143,"post_support_length":6,"short_support_length":6,"pre_minimum_length":93,"post_minimum_length":6,"pre_farthest":275,"post_farthest":6,"low_quality_base_rate_under_q18":0.00121,"low_quality_pre":0.00909,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr16","Pos":89280195,"Ref":"T","Alt":"C","SimpleRepeat_TRF":"N","Neighborhood_sequence":"CGTCCGCCCAGGGCACCGGCCCCACCTGGCCGAGGTGAGAC","read_length":150,"mut_type":"snv","alt_length":1,"total_read":23,"soft_clipped_read":21,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":5,"post_support_length":112,"short_support_length":5,"pre_minimum_length":0,"post_minimum_length":38,"pre_farthest":5,"post_farthest":268,"low_quality_base_rate_under_q18":0.01028,"low_quality_pre":0,"low_quality_post":0.01304,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr17","Pos":7848244,"Ref":"C","Alt":"T","SimpleRepeat_TRF":"N","Neighborhood_sequence":"CCAGGCCCCCTGAGTAAAGCTCCCCAGCCTGTGCCGCCCGG","read_length":150,"mut_type":"snv","alt_length":1,"total_read":17,"soft_clipped_read":16,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":118,"post_support_length":149,"short_support_length":5,"pre_minimum_length":0,"post_minimum_length":5,"pre_farthest":218,"post_farthest":149,"low_quality_base_rate_under_q18":0.01098,"low_quality_pre":0,"low_quality_post":0.02353,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr17","Pos":60600638,"Ref":"C","Alt":"G","SimpleRepeat_TRF":"N","Neighborhood_sequence":"AGCGGTGGCAGCCCGAGAGGGTCGCGACCCTCTCCCGGACG","read_length":150,"mut_type":"snv","alt_length":1,"total_read":12,"soft_clipped_read":9,"flag_hairpin":7,"hairpin_length":15,"pre_support_length":132,"post_support_length":149,"short_support_length":13,"pre_minimum_length":0,"post_minimum_length":13,"pre_farthest":193,"post_farthest":200,"low_quality_base_rate_under_q18":0.00833,"low_quality_pre":0.00833,"low_quality_post":0.01667,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr17","Pos":80754194,"Ref":"C","Alt":"T","SimpleRepeat_TRF":"N","Neighborhood_sequence":"CGCCCTGCGCTGGTGAGTGGTCCCTGCTGTGCCCCTGGGAC","read_length":150,"mut_type":"snv","alt_length":1,"total_read":47,"soft_clipped_read":42,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":147,"post_support_length":6,"short_support_length":6,"pre_minimum_length":65,"post_minimum_length":2,"pre_farthest":284,"post_farthest":6,"low_quality_base_rate_under_q18":0.00468,"low_quality_pre":0,"low_quality_post":0.02553,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr19","Pos":2215680,"Ref":"T","Alt":"A","SimpleRepeat_TRF":"N","Neighborhood_sequence":"CCGAGCTGCTCCCTCACGTGAGTGGCCCAGGCGAGCCTCAC","read_length":150,"mut_type":"snv","alt_length":1,"total_read":16,"soft_clipped_read":16,"flag_hairpin":4,"hairpin_length":15,"pre_support_length":6,"post_support_length":119,"short_support_length":6,"pre_minimum_length":6,"post_minimum_length":58,"pre_farthest":6,"post_farthest":352,"low_quality_base_rate_under_q18":0.0025,"low_quality_pre":0,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr19","Pos":10141146,"Ref":"T","Alt":"A","SimpleRepeat_TRF":"N","Neighborhood_sequence":"TGTTTCCAGGGCTACGGGCAAGGTTGGGAGGATCTTCAAAG","read_length":150,"mut_type":"snv","alt_length":1,"total_read":42,"soft_clipped_read":40,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":5,"post_support_length":144,"short_support_length":5,"pre_minimum_length":5,"post_minimum_length":106,"pre_farthest":5,"post_farthest":399,"low_quality_base_rate_under_q18":0.00349,"low_quality_pre":0,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr19","Pos":14097617,"Ref":"T","Alt":"G","SimpleRepeat_TRF":"N","Neighborhood_sequence":"AGGGGCCAGGTACTCAGGGGGGCCGCACAAGGTCCAAGTGC","read_length":150,"mut_type":"snv","alt_length":1,"total_read":40,"soft_clipped_read":37,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":149,"post_support_length":7,"short_support_length":7,"pre_minimum_length":39,"post_minimum_length":0,"pre_farthest":209,"post_farthest":7,"low_quality_base_rate_under_q18":0.04783,"low_quality_pre":0.02,"low_quality_post":0.07,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr19","Pos":33253988,"Ref":"C","Alt":"G","SimpleRepeat_TRF":"N","Neighborhood_sequence":"ATGGGGATCGTGTTTGTGCAGACACCATACAGCAGTGACAT","read_length":150,"mut_type":"snv","alt_length":1,"total_read":22,"soft_clipped_read":22,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":5,"post_support_length":121,"short_support_length":5,"pre_minimum_length":5,"post_minimum_length":57,"pre_farthest":5,"post_farthest":240,"low_quality_base_rate_under_q18":0.01273,"low_quality_pre":0.02727,"low_quality_post":0.00909,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr19","Pos":42272269,"Ref":"C","Alt":"A","SimpleRepeat_TRF":"N","Neighborhood_sequence":"CCACCCACCTCCACTCGTTCATCCTCCACTGACACAGCCAG","read_length":150,"mut_type":"snv","alt_length":1,"total_read":20,"soft_clipped_read":18,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":145,"post_support_length":7,"short_support_length":7,"pre_minimum_length":73,"post_minimum_length":4,"pre_farthest":145,"post_farthest":7,"low_quality_base_rate_under_q18":0,"low_quality_pre":0,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr2","Pos":15940723,"Ref":"A","Alt":"G","SimpleRepeat_TRF":"N","Neighborhood_sequence":"CCGCGCAGAATCGCCTCCGGGTCCCCTGCAGTCGGCGGGAG","read_length":150,"mut_type":"snv","alt_length":1,"total_read":16,"soft_clipped_read":16,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":6,"post_support_length":129,"short_support_length":6,"pre_minimum_length":6,"post_minimum_length":49,"pre_farthest":6,"post_farthest":343,"low_quality_base_rate_under_q18":0.0075,"low_quality_pre":0,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr2","Pos":29920553,"Ref":"G","Alt":"A","SimpleRepeat_TRF":"N","Neighborhood_sequence":"GCTCCCGGGGCTGCAGCGGCAGCCCCGCAGCTGGGGAGCCC","read_length":150,"mut_type":"snv","alt_length":1,"total_read":10,"soft_clipped_read":4,"flag_hairpin":9,"hairpin_length":15,"pre_support_length":143,"post_support_length":6,"short_support_length":6,"pre_minimum_length":89,"post_minimum_length":5,"pre_farthest":237,"post_farthest":6,"low_quality_base_rate_under_q18":0.00733,"low_quality_pre":0.01,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr3","Pos":49373258,"Ref":"T","Alt":"C","SimpleRepeat_TRF":"N","Neighborhood_sequence":"GGAGGCTGAGATAGGAGAATCGCTTGAACTCAGGAGGCGGA","read_length":150,"mut_type":"snv","alt_length":1,"total_read":56,"soft_clipped_read":21,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":113,"post_support_length":146,"short_support_length":65,"pre_minimum_length":0,"post_minimum_length":36,"pre_farthest":113,"post_farthest":348,"low_quality_base_rate_under_q18":0.0056,"low_quality_pre":0.00714,"low_quality_post":0.01071,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr3","Pos":138188399,"Ref":"A","Alt":"C","SimpleRepeat_TRF":"Y","Neighborhood_sequence":"TTTTTTTTTTTTTTAAAAAACGTTTTTTTAAAGAAAAAGAC","read_length":150,"mut_type":"snv","alt_length":1,"total_read":13,"soft_clipped_read":8,"flag_hairpin":10,"hairpin_length":15,"pre_support_length":140,"post_support_length":17,"short_support_length":17,"pre_minimum_length":75,"post_minimum_length":9,"pre_farthest":221,"post_farthest":17,"low_quality_base_rate_under_q18":0.08051,"low_quality_pre":0.00769,"low_quality_post":0.06154,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":5,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr3","Pos":187729575,"Ref":"A","Alt":"C","SimpleRepeat_TRF":"N","Neighborhood_sequence":"CAGGTTTGAGGCCCTCAGCCCCACTGTAGTGCATATCACTT","read_length":150,"mut_type":"snv","alt_length":1,"total_read":18,"soft_clipped_read":16,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":9,"post_support_length":146,"short_support_length":9,"pre_minimum_length":3,"post_minimum_length":104,"pre_farthest":9,"post_farthest":187,"low_quality_base_rate_under_q18":0.00667,"low_quality_pre":0,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr4","Pos":55125251,"Ref":"C","Alt":"T","SimpleRepeat_TRF":"N","Neighborhood_sequence":"AGAGGCGGCCCGGGTCTCCATGCAGAGCCACAGGGCGACGG","read_length":150,"mut_type":"snv","alt_length":1,"total_read":18,"soft_clipped_read":18,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":129,"post_support_length":7,"short_support_length":7,"pre_minimum_length":81,"post_minimum_length":5,"pre_farthest":207,"post_farthest":7,"low_quality_base_rate_under_q18":0.0037,"low_quality_pre":0,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr5","Pos":132591946,"Ref":"T","Alt":"A","SimpleRepeat_TRF":"N","Neighborhood_sequence":"AATTAACCTCACTGTTGGGAAATTTTCCCAACAAAAAACAG","read_length":150,"mut_type":"snv","alt_length":1,"total_read":26,"soft_clipped_read":7,"flag_hairpin":23,"hairpin_length":15,"pre_support_length":148,"post_support_length":147,"short_support_length":38,"pre_minimum_length":2,"post_minimum_length":1,"pre_farthest":242,"post_farthest":389,"low_quality_base_rate_under_q18":0.01128,"low_quality_pre":0.01154,"low_quality_post":0.02308,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr5","Pos":173800333,"Ref":"G","Alt":"A","SimpleRepeat_TRF":"N","Neighborhood_sequence":"GTTTCATTGGTGCTTAAGGGACTGCTTTCTCCCCTGAAACG","read_length":150,"mut_type":"snv","alt_length":1,"total_read":48,"soft_clipped_read":46,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":142,"post_support_length":7,"short_support_length":7,"pre_minimum_length":87,"post_minimum_length":5,"pre_farthest":354,"post_farthest":7,"low_quality_base_rate_under_q18":0.00417,"low_quality_pre":0,"low_quality_post":0.0125,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr6","Pos":37170774,"Ref":"C","Alt":"A","SimpleRepeat_TRF":"N","Neighborhood_sequence":"GTGCTTCCCCCTTTCCTAGGAAAGGAGAAGGAGCCCCTGGA","read_length":150,"mut_type":"snv","alt_length":1,"total_read":16,"soft_clipped_read":12,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":146,"post_support_length":149,"short_support_length":12,"pre_minimum_length":0,"post_minimum_length":3,"pre_farthest":146,"post_farthest":325,"low_quality_base_rate_under_q18":0.02292,"low_quality_pre":0.04375,"low_quality_post":0.03125,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr9","Pos":36840696,"Ref":"C","Alt":"T","SimpleRepeat_TRF":"N","Neighborhood_sequence":"GTCCCCTTTCCACCAGTCTCTTCCACTTCTGTCCTTTCCTC","read_length":150,"mut_type":"snv","alt_length":1,"total_read":41,"soft_clipped_read":37,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":5,"post_support_length":128,"short_support_length":5,"pre_minimum_length":5,"post_minimum_length":64,"pre_farthest":5,"post_farthest":251,"low_quality_base_rate_under_q18":0.00163,"low_quality_pre":0.00488,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"1-snv","Chr":"chr9","Pos":135167477,"Ref":"C","Alt":"A","SimpleRepeat_TRF":"N","Neighborhood_sequence":"GTTTTTGGCCCAGCAGATGGATTGACGTGAATCTGTGACCA","read_length":150,"mut_type":"snv","alt_length":1,"total_read":38,"soft_clipped_read":34,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":147,"post_support_length":8,"short_support_length":8,"pre_minimum_length":107,"post_minimum_length":2,"pre_farthest":341,"post_farthest":8,"low_quality_base_rate_under_q18":0.00333,"low_quality_pre":0,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":0,"penalty_post":0,"caution":""} {"Sample":"sample","Mut_type":"2-snv","Chr":"chrX","Pos":15801377,"Ref":"CA","Alt":"TG","SimpleRepeat_TRF":"N","Neighborhood_sequence":"TAGCCGGGATTACAGGCACGTGCCGCCACACCCAGTTAATTT","read_length":150,"mut_type":"snv","alt_length":2,"total_read":7,"soft_clipped_read":3,"flag_hairpin":0,"hairpin_length":0,"pre_support_length":125,"post_support_length":76,"short_support_length":76,"pre_minimum_length":77,"post_minimum_length":22,"pre_farthest":396,"post_farthest":76,"low_quality_base_rate_under_q18":0.00095,"low_quality_pre":0.01429,"low_quality_post":0,"pre_rep_status":0,"post_rep_status":0,"homopolymer_status":0,"indel_status":0,"indel_length":0,"distant_homology":0,"penalty_pre":3,"penalty_post":3,"caution":""}